ECOFECT > Bibliography


The list of publications of  the members of ECOFECT, linked to the themes of the Labex or mentioning ECOFECT (affiliations and/or aknowledgments) is available at:

List of publications

- 2012

- 2013

- 2014

- 2015 :

1.    S. Alais, R. Mahieux, H. Dutartre. “Viral source-independent high susceptibility of dendritic cells to HTLV-1 infection compared to T lymphocytes”. J Virol. 2015. Aug 12. pii: JVI.01799-15.

2.    L. Aoudjehane, G. Bisch, O. Scatton, C. Granier, J. Gaston, C. Housset, P. Roingeard, FL. Cosset ,F. Perdigao, P. Balladur, T. Wakita, Y. Calmus, F. Conti. “Infection of Human Liver Myofibroblasts by Hepatitis C Virus: A Direct Mechanism of Liver Fibrosis in Hepatitis C”. PLoS One.2015. Jul 27;10(7):e0134141.

3.    S. Assil, B. Webster, M. Dreux.” Regulation of the Host Antiviral State by Intercellular Communications”. Viruses. 2015. Aug 19;7(8):4707-33.

4.    C. Baudet, B. Donati, B. Sinaimeri, P. Crescenzi, C. Gautier, C. Matias, M.-F. Sagot. “Cophylogeny Reconstruction via an Approximate Bayesian Computation”. Systematic Biology. 2015. 64 (3): 416-431.

5.    S. Calattini, F. Fusil, J. Mancip, V. Loan Dao Thi, C. Granier, N. Gadot, JY. Scoazec, D. Lavillette, M. Dreux, FL. Cosset. “Functional and biochemical characterization of HCV particles produced in a humanized liver mouse model”. J Biol Chem. 2015. Sep 18;290(38):23173-87

6.    B. Donati, C. Baudet, B. Sinaimeri, P. Crescenzi, M.-F. Sagot. “EUCALYPT: Efficient tree reconciliation enumerator”. Algorithms for Molecular Biology. 2015. 10:3.

7.    F. Douam, D. Lavillette, FL. Cosset. “The mechanism of HCV entry into host cells”. Prog Mol Biol Transl Sci. 2015. 129:63-107.

8.    M. Dujardin, V. Madan, R. Montserret, P. Ahuja, I. Huvent, H. Launay, A. Leroy, R. Bartenschlager, F. Penin , G. Lippens, X. Hanoulle.” A Proline-Tryptophan Turn in the Intrinsically Disordered Domain 2 of NS5A Protein Is Essential for Hepatitis C Virus RNA Replication”. J Biol Chem. 2015. Jul 31;290(31):19104-20.

9.    O. Duron, V. Noël, K. D. McCoy, M. Bonazzi, K. Sidi-Boumedine, O. Morel, F. Vavre, L. Zenner, E. Jourdain, P. Durand, C. Arnathau, F. Renaud, J.F. Trape, A. S. Biguezoton, J. Cremaschi, M. Dietrich, E. Léger, A. Appelgren, M. Dupraz, E. Gomez-Diaz, G. Diatta, G.K. Dayo, Hassane Adakal, S. Zoungrana, L. Vial and C. Chevillon. “The Recent Evolution of a Maternally-Inherited Endosymbiont of Ticks Led to the Emergence of the Q Fever Pathogen, Coxiella burnetii”. PLOS Pathogen. 2015. May 15. DOI:10.1371/journal.ppat.1004892

10.    P. Falson, B. Bartosch, K. Alsaleh, B.A. Tews, A. Loquet, Y. Ciczora, L. Riva, C. Montigny, C. Montpellier, G. Duverlie,E.I. Pécheur, L. le Maire, FL. Cosset, J. Dubuisson, F. Penin. “Hepatitis C virus envelope glycoprotein E1 forms trimers at the surface of the virion ”. J Virol. 2015. Aug 5. pii: JVI.00991-15.

11.    F.Fusil, S.Calattini , F. Amirache, J. Mancip, C. Costa C, J.B. Robbins, F. Douam, D. Lavillette, M. Law, T. Defrance, E. Verhoeyen, FL. Cosset. “A lentiviral vector allowing physiologically-regulated membrane-anchored and secreted antibody expression depending on B cell maturation status”. Mol Ther. 2015. Aug 18. doi: 10.1038/mt.2015.148.

12.    ML. Fogeron, D. Paul, V Jirasko, R. Montserret, D. Lacabanne, J. Molle, A. Badillo, C. Boukadida, S. Georgeault, P. Roingeard, A. Martin, R. Bartenschlager, F. Penin, A. Böckmann. “Functional expression, purification, characterization, and membrane reconstitution of non-structural protein 2 from hepatitis C virus”. Protein Expr Purif. 2015. Aug 29. pii: S1046-5928(15)30047-4.

13.    Hardet R, Chevalier B, Dupaty L, Naïmi Y, Riou G, Drouot L, Jean L, Salvetti A, Boyer O, Adriouch S. “Oral-tolerization Prevents Immune Responses and Improves Transgene Persistence Following Gene Transfer Mediated by Adeno-associated Viral Vector”. Mol Ther. 2015. Aug 12. doi: 10.1038/mt.2015.

14.    E. Hellard, D. Pontier, A. Siberchicot, F. Sauvage, D. Fouchet. "Unknown age in health disorders: a method to account for its cumulative effect and an application to feline viruses interactions”. Epidemics. 2015. 11, 48–55.

15.    K. Hueging, R. Weller, M. Doepke, G. Vieyres, D. Todt, B. Wölk, F.W. Vondran, R. Geffers, C. Lauber, L. Kaderali, F. Penin, T. Pietschmann.” Several Human Liver Cell Expressed Apolipoproteins Complement HCV Virus Production with Varying Efficacy Conferring Differential Specific Infectivity to Released Viruses”. PLoS One. 2015. Jul 30; 10(7):e0134529.

16.    EM. Jurgens, C. Mathieu, LM. Palermo, D. Hardie, B. Horvat, A. Moscona and M. Porotto. “Measles fusion machinery is dysregulated in neuropathogenic variants”. Mbio. 2015. vol. 6 no. 1 e02528-14.

17.    C. Lévy, E. Verhoeyen, F-L. Cosset. “Surface engineering of lentiviral vectors for gene transfer into gene therapy target cells”. Current Opinion in Pharmacology. 2015. 24:79–85.

18.    C. Mathieu , K.P Dhondt , M. Chalons , S. Mely , H. Raoul , D. Negre , F.-L. Cosset, D. Gerlier, R.R Vives and B. Horvat. “Heparan Sulfate-dependent enhancement of Henipavirus infection”. Mbio. 2015. vol. 6 no. 2 e02427-14

19.    C. Mathieu and B.Horvat. “Henipavirus pathogenesis and anti-viral approaches”. 2015. Expert Rev Anti Infect Ther. 2015. Mar;13(3):343-54

20.    BH. Meier and A. Böckmann. “The structure of fibrils from ‘misfolded’ proteins”. Current Opinion in Structural Biology. 2015. 30, 43–49.

21.    N. Messad, TK. Prajsnar,G. Lina, D. O'Callaghan, SJ. Foster, SA. Renshaw, EP. Skaar, M. Bes, C. Dunyach-Remy, F. Vandenesch, A. Sotto, JP. Lavigne. “Existence of a colonizing Staphylococcus aureus strain isolated in diabetic foot ulcers”. Diabetes. 2015. Apr 21. pii: db150031.

22.    R. Millet, N. Jolinon, XN. Nguyen, G. Berger, A. Cimarelli, A. Greco, P. Bertrand, M. Odenthal, H. Büning, A. Salvetti. “Impact of the MRN complex on Adeno-Associated Virus integration and replication during co-infection with Herpes Simplex Virus type 1”. J Virol. 2015. Apr 22. pii: JVI.00171-15.

23.    M. Roussel, D. Pontier, B.Ngoubangoye, M.Kazanjid, D. Verrier, D.Fouchet. “Modes of transmission of Simian T-lymphotropic Virus Type 1 in semi-captive mandrills (Mandrillus sphinx)”. Veterinary Microbiology. 2015. 179. 155-161.

24.    M. Schledorn, BH. Meier, A. Böckmann. “Alternative salt bridge formation in Aβ-a hallmark of early-onset Alzheimer's disease?”. Front Mol Biosci. 2015. Apr 28;2:14.

25.    M.Shirinian, Z. Kambris, L. Hamadeh,  C.Grabbe, C. Journo, R. Mahieux, A. Bazarbachi. “A transgenic Drosophila melanogaster model to study 1 Human T-Lymphotropic Virus oncoprotein Tax-1-driven 2 transformation in vivo”. J. Virol. 2015. Aug;89(15):8092-5.

26.    AK. Schütz, T. Vagt, M. Huber, OY. Ovchinnikova, R. Cadalbert, J. Wall, P. Güntert, A. Böckmann, R. Glockshuber, BH. Meier. “Atomic-Resolution Three-Dimensional Structure of Amyloid β Fibrils Bearing the Osaka Mutation”. Angew Chem Int Ed Engl. 2015. Jan 2;54(1):331-5.

27.    AN. Spaan, T. Reyes-Robles, C.Badiou, J. A.G. vanStrijp, T. Henry, V. J. Torres. “Staphylococcus aureus targets the Duffy antigen receptor for chemokines (DARC) to lyse erythrocytes.” Cell Host & Microbe. 2015. 18, 1–8, September 9.

28.    RG. Tawar, CC. Colpitts, J. Timm, T. Fehm, M. Roggendorf, H. Meisel, N. Meyer, F. Habersetzer, FL. Cosset, T. Berg, MB. Zeisel, TF. Baumert. “Acute hepatitis C virus infection induces anti-host cell receptor antibodies with virus-neutralizing properties”. Hepatology. 2015 May 23.

29.    P. Verlhac, I. P. Grégoire, O. Azocar, D. S. Petkova, J. Baguet, C. Viret, M. Faure. "Autophagy Receptor NDP52 Regulates Pathogen-Containing Autophagosome Maturation". Cell Host & Microbe, 2015. Apr 8; 17(4):515-25.

30.    MB. Zeisel, J. Lucifora, WS. Mason, C. Sureau, J. Beck, M. Levrero, M. Kann, PA. Knolle, M. Benkirane, Durantel, ML. Michel, B. Autran, F-L. Cosset, H. Strick-Marchand, C. Trépo, JH. Kao, F. Carrat, K. Lacombe, RF. Schinazi, F. Barré-Sinoussi,J-F. Delfraissy, F. Zoulim. "Towards an HBV cure: state-of-the-art and unresolved questions-report of the ANRS workshop on HBV cure.” Gut. 2015. Feb 10. pii: gutjnl-2014-308943.

Other communications
1.    F. Douam, D. Lavillette, F-L. Cosset. 2015. Chapter 3 - The Mechanism of HCV Entry into Host Cells. Progress in Molecular Biology and Translational Science. Volume 129, pp63–107.


1.    V. Lelogeais, M. Faure, F. Vavre, P. Doublet. 2015. Identification of Legionella pneumophla virulence factors required to subvert host autophagy. FEMS 2015, Maastricht The Netherlands, June 7–11.